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Ticke: #34276
authorTakuo Yasunaga <yasunaga@bio.kyutech.ac.jp>
Thu, 4 Sep 2014 07:11:20 +0000 (16:11 +0900)
committerTakuo Yasunaga <yasunaga@bio.kyutech.ac.jp>
Thu, 4 Sep 2014 07:11:20 +0000 (16:11 +0900)
modified:   src/Tools/mrcImage/mrcImageSiemensStar/Config/OptionControlFile
typechange: src/Tools/mrcImage/mrcImageSiemensStar/Makefile
modified:   src/Tools/mrcImage/mrcImageSiemensStar/doc/Makefile
modified:   src/Tools/mrcImage/mrcImageSiemensStar/inc/mrcImageSiemensStar.h
modified:   src/Tools/mrcImage/mrcImageSiemensStar/src/mrcImageSiemensStar.c
modified:   src/Tools/mrcImage/mrcImageSiemensStar/src/test/Makefile

Not yet:
new file:   env/install-eos.sh
modified:   hostdepend/X86MAC64/src/Tools/Test/cufft/src/X86MAC64/.Depend
modified:   hostdepend/X86MAC64/src/Tools/Test/cufft/src/X86MAC64/Makefile

src/Tools/Test/cufft/src/X86MAC64/.Depend patch | blob | history
src/Tools/Test/cufft/src/X86MAC64/Makefile patch | blob | history
src/Tools/mrcImage/mrcImageSiemensStar/src/X86MAC64/mrcImageSiemensStar patch | blob | history

diff --git a/src/Tools/Test/cufft/src/X86MAC64/.Depend b/src/Tools/Test/cufft/src/X86MAC64/.Depend
index e4b5500..f37410c 100644 (file)
--- a/src/Tools/Test/cufft/src/X86MAC64/.Depend
+++ b/src/Tools/Test/cufft/src/X86MAC64/.Depend
@@ -1,116 +1,131 @@
-argCheck.o: argCheck.c /usr/include/stdio.h /usr/include/sys/cdefs.h \
+cufft.o: cufft.cu /usr/include/stdio.h /usr/include/sys/cdefs.h \
   /usr/include/sys/_symbol_aliasing.h \
   /usr/include/sys/_posix_availability.h /usr/include/Availability.h \
   /usr/include/AvailabilityInternal.h /usr/include/_types.h \
   /usr/include/sys/_types.h /usr/include/machine/_types.h \
-  /usr/include/i386/_types.h /usr/include/secure/_stdio.h \
-  /usr/include/secure/_common.h /usr/include/stdlib.h \
-  /usr/include/sys/wait.h /usr/include/sys/signal.h \
-  /usr/include/sys/appleapiopts.h /usr/include/machine/signal.h \
-  /usr/include/i386/signal.h /usr/include/i386/_structs.h \
-  /usr/include/sys/_structs.h /usr/include/machine/_structs.h \
-  /usr/include/mach/i386/_structs.h /usr/include/sys/resource.h \
+  /usr/include/i386/_types.h /usr/include/sys/_types/_va_list.h \
+  /usr/include/sys/_types/_size_t.h /usr/include/sys/_types/_null.h \
+  /usr/include/sys/_types/_off_t.h /usr/include/sys/_types/_ssize_t.h \
+  /usr/include/stdlib.h /usr/include/sys/wait.h \
+  /usr/include/sys/_types/_pid_t.h /usr/include/sys/_types/_id_t.h \
+  /usr/include/sys/signal.h /usr/include/sys/appleapiopts.h \
+  /usr/include/machine/signal.h /usr/include/i386/signal.h \
+  /usr/include/machine/_mcontext.h /usr/include/i386/_mcontext.h \
+  /usr/include/mach/i386/_structs.h \
+  /usr/include/sys/_types/_sigaltstack.h \
+  /usr/include/sys/_types/_ucontext.h \
+  /usr/include/sys/_types/_pthread_attr_t.h \
+  /usr/include/sys/_types/_sigset_t.h /usr/include/sys/_types/_uid_t.h \
+  /usr/include/sys/resource.h \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/5.1/include/stdint.h \
+  /usr/include/stdint.h /usr/include/sys/_types/_int8_t.h \
+  /usr/include/sys/_types/_int16_t.h /usr/include/sys/_types/_int32_t.h \
+  /usr/include/sys/_types/_int64_t.h /usr/include/_types/_uint8_t.h \
+  /usr/include/_types/_uint16_t.h /usr/include/_types/_uint32_t.h \
+  /usr/include/_types/_uint64_t.h /usr/include/sys/_types/_intptr_t.h \
+  /usr/include/sys/_types/_uintptr_t.h /usr/include/_types/_intmax_t.h \
+  /usr/include/_types/_uintmax_t.h /usr/include/sys/_types/_timeval.h \
   /usr/include/machine/endian.h /usr/include/i386/endian.h \
   /usr/include/sys/_endian.h /usr/include/libkern/_OSByteOrder.h \
   /usr/include/libkern/i386/_OSByteOrder.h /usr/include/alloca.h \
-  /usr/include/machine/types.h /usr/include/i386/types.h \
-  /usr/include/i386/_types.h /Applications/Eos.app/Eos/include/string.h \
-  /usr/include/math.h ../inc/config.h ../inc/../inc/mrcImageFFT.h \
-  /Applications/Eos.app/Eos/include/genUtil.h \
-  /Applications/Eos.app/Eos/include/String.h \
-  /Applications/Eos.app/Eos/include/File.h \
-  /Applications/Eos.app/Eos/include/Memory.h \
-  /usr/llvm-gcc-4.2/bin/../lib/gcc/i686-apple-darwin11/4.2.1/include/limits.h \
-  /usr/llvm-gcc-4.2/bin/../lib/gcc/i686-apple-darwin11/4.2.1/include/syslimits.h \
-  /Applications/Xcode.app/Contents/Developer/usr/llvm-gcc-4.2/lib/gcc/i686-apple-darwin11/4.2.1/include/limits.h \
-  /Applications/Xcode.app/Contents/Developer/usr/llvm-gcc-4.2/lib/gcc/i686-apple-darwin11/4.2.1/include/syslimits.h \
+  /usr/include/sys/_types/_ct_rune_t.h /usr/include/sys/_types/_rune_t.h \
+  /usr/include/sys/_types/_wchar_t.h /usr/include/machine/types.h \
+  /usr/include/i386/types.h /usr/include/sys/_types/___offsetof.h \
+  /usr/include/sys/_types/_dev_t.h /usr/include/sys/_types/_mode_t.h \
+  /Users/tacyas/Eos/include/string.h /usr/include/math.h ../inc/config.h \
+  ../inc/../inc/cufft.h /Users/tacyas/Eos/include/genUtil.h \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/iostream \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/__config \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/ios \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/iosfwd \
+  /usr/include/wchar.h /usr/include/sys/_types/_mbstate_t.h \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/5.1/include/stdarg.h \
+  /usr/include/time.h /usr/include/_structs.h \
+  /usr/include/sys/_structs.h /usr/include/sys/_types/_timespec.h \
+  /usr/include/sys/_types/_clock_t.h /usr/include/sys/_types/_time_t.h \
+  /usr/include/_wctype.h /usr/include/sys/_types/_wint_t.h \
+  /usr/include/_types/_wctype_t.h /usr/include/ctype.h \
+  /usr/include/runetype.h \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/__locale \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/string \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/cstring \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/cstdio \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/cwchar \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/cwctype \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/cctype \
+  /usr/include/wctype.h /usr/include/_types/_wctrans_t.h \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/algorithm \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/initializer_list \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/cstddef \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/5.1/include/stddef.h \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/type_traits \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/utility \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/__tuple \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/__tuple_03 \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/memory \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/typeinfo \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/exception \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/cstdint \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/new \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/limits \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/__undef_min_max \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/iterator \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/__functional_base \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/__functional_base_03 \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/tuple \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/stdexcept \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/mutex \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/__mutex_base \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/chrono \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/ctime \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/ratio \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/climits \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/5.1/include/limits.h \
   /usr/include/limits.h /usr/include/machine/limits.h \
   /usr/include/i386/limits.h /usr/include/i386/_limits.h \
-  /usr/include/sys/syslimits.h
-cufft.o: cufft.c /usr/include/stdio.h /usr/include/sys/cdefs.h \
-  /usr/include/sys/_symbol_aliasing.h \
-  /usr/include/sys/_posix_availability.h /usr/include/Availability.h \
-  /usr/include/AvailabilityInternal.h /usr/include/_types.h \
-  /usr/include/sys/_types.h /usr/include/machine/_types.h \
-  /usr/include/i386/_types.h /usr/include/secure/_stdio.h \
-  /usr/include/secure/_common.h /usr/include/stdlib.h \
-  /usr/include/sys/wait.h /usr/include/sys/signal.h \
-  /usr/include/sys/appleapiopts.h /usr/include/machine/signal.h \
-  /usr/include/i386/signal.h /usr/include/i386/_structs.h \
-  /usr/include/sys/_structs.h /usr/include/machine/_structs.h \
-  /usr/include/mach/i386/_structs.h /usr/include/sys/resource.h \
-  /usr/include/machine/endian.h /usr/include/i386/endian.h \
-  /usr/include/sys/_endian.h /usr/include/libkern/_OSByteOrder.h \
-  /usr/include/libkern/i386/_OSByteOrder.h /usr/include/alloca.h \
-  /usr/include/machine/types.h /usr/include/i386/types.h \
-  /usr/include/i386/_types.h /Applications/Eos.app/Eos/include/string.h \
-  /usr/include/math.h ../inc/config.h ../inc/../inc/mrcImageFFT.h \
-  /Applications/Eos.app/Eos/include/mrcImage.h \
-  /Applications/Eos.app/Eos/include/genUtil.h \
-  /Applications/Eos.app/Eos/include/ctfInfo.h \
-  /Applications/Eos.app/Eos/include/Vector.h \
-  /Applications/Eos.app/Eos/include/Matrix3D.h \
-  /Applications/Eos.app/Eos/include/Array.h
-init.o: init.c /usr/include/stdio.h /usr/include/sys/cdefs.h \
-  /usr/include/sys/_symbol_aliasing.h \
-  /usr/include/sys/_posix_availability.h /usr/include/Availability.h \
-  /usr/include/AvailabilityInternal.h /usr/include/_types.h \
-  /usr/include/sys/_types.h /usr/include/machine/_types.h \
-  /usr/include/i386/_types.h /usr/include/secure/_stdio.h \
-  /usr/include/secure/_common.h /usr/include/stdlib.h \
-  /usr/include/sys/wait.h /usr/include/sys/signal.h \
-  /usr/include/sys/appleapiopts.h /usr/include/machine/signal.h \
-  /usr/include/i386/signal.h /usr/include/i386/_structs.h \
-  /usr/include/sys/_structs.h /usr/include/machine/_structs.h \
-  /usr/include/mach/i386/_structs.h /usr/include/sys/resource.h \
-  /usr/include/machine/endian.h /usr/include/i386/endian.h \
-  /usr/include/sys/_endian.h /usr/include/libkern/_OSByteOrder.h \
-  /usr/include/libkern/i386/_OSByteOrder.h /usr/include/alloca.h \
-  /usr/include/machine/types.h /usr/include/i386/types.h \
-  /usr/include/i386/_types.h /Applications/Eos.app/Eos/include/string.h \
-  /usr/include/math.h ../inc/config.h ../inc/../inc/mrcImageFFT.h \
-  /Applications/Eos.app/Eos/include/genUtil.h \
-  /Applications/Eos.app/Eos/include/String.h \
-  /Applications/Eos.app/Eos/include/File.h \
-  /Applications/Eos.app/Eos/include/Memory.h \
-  /usr/llvm-gcc-4.2/bin/../lib/gcc/i686-apple-darwin11/4.2.1/include/limits.h \
-  /usr/llvm-gcc-4.2/bin/../lib/gcc/i686-apple-darwin11/4.2.1/include/syslimits.h \
-  /Applications/Xcode.app/Contents/Developer/usr/llvm-gcc-4.2/lib/gcc/i686-apple-darwin11/4.2.1/include/limits.h \
-  /Applications/Xcode.app/Contents/Developer/usr/llvm-gcc-4.2/lib/gcc/i686-apple-darwin11/4.2.1/include/syslimits.h \
-  /usr/include/limits.h /usr/include/machine/limits.h \
-  /usr/include/i386/limits.h /usr/include/i386/_limits.h \
-  /usr/include/sys/syslimits.h
-usage.o: usage.c /usr/include/stdio.h /usr/include/sys/cdefs.h \
-  /usr/include/sys/_symbol_aliasing.h \
-  /usr/include/sys/_posix_availability.h /usr/include/Availability.h \
-  /usr/include/AvailabilityInternal.h /usr/include/_types.h \
-  /usr/include/sys/_types.h /usr/include/machine/_types.h \
-  /usr/include/i386/_types.h /usr/include/secure/_stdio.h \
-  /usr/include/secure/_common.h /usr/include/stdlib.h \
-  /usr/include/sys/wait.h /usr/include/sys/signal.h \
-  /usr/include/sys/appleapiopts.h /usr/include/machine/signal.h \
-  /usr/include/i386/signal.h /usr/include/i386/_structs.h \
-  /usr/include/sys/_structs.h /usr/include/machine/_structs.h \
-  /usr/include/mach/i386/_structs.h /usr/include/sys/resource.h \
-  /usr/include/machine/endian.h /usr/include/i386/endian.h \
-  /usr/include/sys/_endian.h /usr/include/libkern/_OSByteOrder.h \
-  /usr/include/libkern/i386/_OSByteOrder.h /usr/include/alloca.h \
-  /usr/include/machine/types.h /usr/include/i386/types.h \
-  /usr/include/i386/_types.h ../inc/config.h ../inc/../inc/mrcImageFFT.h
-util.o: util.c /usr/include/stdio.h /usr/include/sys/cdefs.h \
-  /usr/include/sys/_symbol_aliasing.h \
-  /usr/include/sys/_posix_availability.h /usr/include/Availability.h \
-  /usr/include/AvailabilityInternal.h /usr/include/_types.h \
-  /usr/include/sys/_types.h /usr/include/machine/_types.h \
-  /usr/include/i386/_types.h /usr/include/secure/_stdio.h \
-  /usr/include/secure/_common.h /usr/include/stdlib.h \
-  /usr/include/sys/wait.h /usr/include/sys/signal.h \
-  /usr/include/sys/appleapiopts.h /usr/include/machine/signal.h \
-  /usr/include/i386/signal.h /usr/include/i386/_structs.h \
-  /usr/include/sys/_structs.h /usr/include/machine/_structs.h \
-  /usr/include/mach/i386/_structs.h /usr/include/sys/resource.h \
-  /usr/include/machine/endian.h /usr/include/i386/endian.h \
-  /usr/include/sys/_endian.h /usr/include/libkern/_OSByteOrder.h \
-  /usr/include/libkern/i386/_OSByteOrder.h /usr/include/alloca.h \
-  /usr/include/machine/types.h /usr/include/i386/types.h \
-  /usr/include/i386/_types.h ../inc/config.h ../inc/../inc/mrcImageFFT.h
+  /usr/include/sys/syslimits.h \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/system_error \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/cerrno \
+  /usr/include/errno.h /usr/include/sys/errno.h /usr/include/pthread.h \
+  /usr/include/pthread_impl.h /usr/include/sched.h \
+  /usr/include/sys/_types/_pthread_cond_t.h \
+  /usr/include/sys/_types/_pthread_condattr_t.h \
+  /usr/include/sys/_types/_pthread_key_t.h \
+  /usr/include/sys/_types/_pthread_mutex_t.h \
+  /usr/include/sys/_types/_pthread_mutexattr_t.h \
+  /usr/include/sys/_types/_pthread_once_t.h \
+  /usr/include/sys/_types/_pthread_rwlock_t.h \
+  /usr/include/sys/_types/_pthread_rwlockattr_t.h \
+  /usr/include/sys/_types/_pthread_t.h \
+  /usr/include/sys/_types/_mach_port_t.h \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/functional \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/__functional_03 \
+  /usr/include/locale.h /usr/include/_locale.h /usr/include/xlocale.h \
+  /usr/include/_xlocale.h /usr/include/xlocale/_ctype.h \
+  /usr/include/xlocale/__wctype.h /usr/include/xlocale/_stdio.h \
+  /usr/include/xlocale/_stdlib.h /usr/include/xlocale/_time.h \
+  /usr/include/xlocale/_wchar.h /usr/include/xlocale/_wctype.h \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/streambuf \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/istream \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/ostream \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/locale \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/cstdlib \
+  /usr/include/nl_types.h /usr/include/sys/types.h \
+  /usr/include/sys/_types/_blkcnt_t.h \
+  /usr/include/sys/_types/_blksize_t.h /usr/include/sys/_types/_gid_t.h \
+  /usr/include/sys/_types/_in_addr_t.h \
+  /usr/include/sys/_types/_in_port_t.h /usr/include/sys/_types/_ino_t.h \
+  /usr/include/sys/_types/_ino64_t.h /usr/include/sys/_types/_key_t.h \
+  /usr/include/sys/_types/_nlink_t.h \
+  /usr/include/sys/_types/_useconds_t.h \
+  /usr/include/sys/_types/_suseconds_t.h \
+  /usr/include/sys/_types/_rsize_t.h /usr/include/sys/_types/_errno_t.h \
+  /usr/include/sys/_types/_fd_def.h \
+  /usr/include/sys/_types/_fd_setsize.h \
+  /usr/include/sys/_types/_fd_set.h /usr/include/sys/_types/_fd_clr.h \
+  /usr/include/sys/_types/_fd_zero.h /usr/include/sys/_types/_fd_isset.h \
+  /usr/include/sys/_types/_fd_copy.h \
+  /usr/include/sys/_types/_fsblkcnt_t.h \
+  /usr/include/sys/_types/_fsfilcnt_t.h /usr/include/_types/_nl_item.h \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/bitset \
+  /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/__bit_reference
diff --git a/src/Tools/Test/cufft/src/X86MAC64/Makefile b/src/Tools/Test/cufft/src/X86MAC64/Makefile
index f938d74..ec61247 100755 (executable)
--- a/src/Tools/Test/cufft/src/X86MAC64/Makefile
+++ b/src/Tools/Test/cufft/src/X86MAC64/Makefile
@@ -1,7 +1,7 @@
-include ../../Config/Define.inc
-include ../../../Config/Define.inc
-include ../../../../Config/Define.inc
-include ../../../../../Config/DefineTool.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config/Define.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/Config/Define.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/Config/Define.inc
+include $(EOS_HOME)/src/Config/DefineTool.inc
 
 LIBFILES   = \
                        $(LIBPREFIX)EosObjects$(LIBSUFFIX) 
@@ -60,47 +60,47 @@ REALMODULESDEBUG    = \
 
 
 $(OBJECTNAME): $(MODULES) $(LIBFILES)
-       @if [ -f ../$(OBJECTNAME).c ] ; \
+       @if [ -f $(VPATH)/$(OBJECTNAME).c ] ; \
        then \
                echo $(CC) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
                $(CC) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
        fi
-       @if [ -f ../$(OBJECTNAME).cc ] ; \
+       @if [ -f $(VPATH)/$(OBJECTNAME).cc ] ; \
        then \
                echo $(CXX) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
                $(CXX) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
        fi
-       @if [ -f ../$(OBJECTNAME).ccm ] ; \
+       @if [ -f $(VPATH)/$(OBJECTNAME).ccm ] ; \
        then \
                echo "MICO"; \
                echo $(MICOLD) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
                $(MICOLD) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
        fi
-       @if [ -f ../$(OBJECTNAME).cu ] ; \
+       @if [ -f $(VPATH)/$(OBJECTNAME).cu ] ; \
        then \
-               echo $(CC) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
-               $(CC) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               echo $(NVCC) $(NVCCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) $(CUDALIB) $(CUDAINC) -o $@ ;  \
+               $(NVCC) $(NVCCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) $(CUDALIB) $(CUDAINC) -o $@ ;  \
        fi
 
 
 $(OBJECTNAME).debug: $(MODULESDEBUG) $(LIBFILESDEBUG)
-       @if [ -f ../$(OBJECTNAME).c ] ; \
+       @if [ -f $(VPATH)/$(OBJECTNAME).c ] ; \
        then \
                echo $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
                $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
        fi
-       @if [ -f ../$(OBJECTNAME).cc ] ; \
+       @if [ -f $(VPATH)/$(OBJECTNAME).cc ] ; \
        then \
                echo $(CXX) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
                $(CXX) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
        fi
-       @if [ -f ../$(OBJECTNAME).ccm ] ; \
+       @if [ -f $(VPATH)/$(OBJECTNAME).ccm ] ; \
        then \
                echo "MICO"; \
                echo $(MICOLD) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
                $(MICOLD) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
        fi
-       @if [ -f ../$(OBJECTNAME).cu ] ; \
+       @if [ -f $(VPATH)/$(OBJECTNAME).cu ] ; \
        then \
                echo $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
                $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
@@ -111,4 +111,4 @@ $(OBJECTNAME).cudagdb: $(MODULESCUDAGDB) $(LIBFILESDEBUG)
        $(NVCC) $(NVCCOPTSCUDAGDB) $(MODULESCUDAGDB) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@
 
 include ./.Depend
-include ../../Config/Target.inc
+include  $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config/Target.inc
diff --git a/src/Tools/mrcImage/mrcImageSiemensStar/src/X86MAC64/mrcImageSiemensStar b/src/Tools/mrcImage/mrcImageSiemensStar/src/X86MAC64/mrcImageSiemensStar
index 845802a..9ade48e 100755 (executable)
Binary files a/src/Tools/mrcImage/mrcImageSiemensStar/src/X86MAC64/mrcImageSiemensStar and b/src/Tools/mrcImage/mrcImageSiemensStar/src/X86MAC64/mrcImageSiemensStar differ
binary repository for general OS-X(64bits)
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