removed all files

[xerial/xerial-core.git] / src / test / java / org / xerial / silk / RelationExtractTest.java

diff --git a/src/test/java/org/xerial/silk/RelationExtractTest.java b/src/test/java/org/xerial/silk/RelationExtractTest.java
deleted file mode 100755 (executable)
index a217cd6..0000000
--- a/src/test/java/org/xerial/silk/RelationExtractTest.java
+++ /dev/null
@@ -1,97 +0,0 @@
-/*--------------------------------------------------------------------------\r
- *  Copyright 2009 Taro L. Saito\r
- *\r
- *  Licensed under the Apache License, Version 2.0 (the "License");\r
- *  you may not use this file except in compliance with the License.\r
- *  You may obtain a copy of the License at\r
- *\r
- *     http://www.apache.org/licenses/LICENSE-2.0\r
- *\r
- *  Unless required by applicable law or agreed to in writing, software\r
- *  distributed under the License is distributed on an "AS IS" BASIS,\r
- *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\r
- *  See the License for the specific language governing permissions and\r
- *  limitations under the License.\r
- *--------------------------------------------------------------------------*/\r
-//--------------------------------------\r
-// XerialJ\r
-//\r
-// RelationExtractTest.java\r
-// Since: Jul 2, 2009 2:38:03 PM\r
-//\r
-// $URL$\r
-// $Author$\r
-//--------------------------------------\r
-package org.xerial.silk;\r
-\r
-import java.util.ArrayList;\r
-import java.util.List;\r
-\r
-import org.junit.After;\r
-import org.junit.Before;\r
-import org.junit.Test;\r
-import org.xerial.lens.Lens;\r
-import org.xerial.lens.ObjectLens;\r
-import org.xerial.util.FileResource;\r
-import org.xerial.util.log.Logger;\r
-\r
-public class RelationExtractTest\r
-{\r
-    private static Logger _logger = Logger.getLogger(RelationExtractTest.class);\r
-\r
-    @Before\r
-    public void setUp() throws Exception\r
-    {}\r
-\r
-    @After\r
-    public void tearDown() throws Exception\r
-    {}\r
-\r
-    public static class Coordinate\r
-    {\r
-        public String name;\r
-        public String species;\r
-\r
-    }\r
-\r
-    public static class GeneList\r
-    {\r
-        private List<Gene> geneList = new ArrayList<Gene>();\r
-\r
-        public void add(Coordinate coordinate, Gene gene)\r
-        {\r
-            _logger.info(String\r
-                    .format("corrdinate %s, gene %s", ObjectLens.toJSON(coordinate), ObjectLens.toJSON(gene)));\r
-        }\r
-\r
-        public void add(Gene g)\r
-        {\r
-            geneList.add(g);\r
-        }\r
-\r
-        public List<Gene> getGeneList()\r
-        {\r
-            return geneList;\r
-        }\r
-\r
-    }\r
-\r
-    public static class Gene\r
-    {\r
-        public String name;\r
-        public long start;\r
-        public String strand;\r
-        public String sequence;\r
-\r
-    }\r
-\r
-    @Test\r
-    public void test() throws Exception\r
-    {\r
-        GeneList geneList = Lens\r
-                .loadSilk(GeneList.class, FileResource.open(RelationExtractTest.class, "sequence.silk"));\r
-\r
-        _logger.info(ObjectLens.toJSON(geneList));\r
-    }\r
-\r
-}\r